Coordinates schemas
Table of contents
- External XYZ absolute
- Stereotaxic Bregma absolute
- Stereotaxic Bregma brain surface
- Stereotaxic Lambda absolute
- Stereotaxic Lambda brain surface
- Stereotaxic XY surface
- Stereotaxic XYZ absolute
External XYZ absolute
{
"type": "object",
"title": "External XYZ absolute",
"properties": {
"x": {
"title": "X coordinate (m)",
"brief": "Y",
"units": "mm",
"type": "number"
},
"y": {
"title": "Y coordinate (m)",
"brief": "Y",
"units": "mm",
"type": "number"
},
"z": {
"title": "Z coordinates (m)",
"brief": "Z",
"units": "mm",
"type": "number"
},
"xAngle": {
"title": "X angle (degrees)",
"brief": "X angle",
"units": "degrees",
"type": "number"
},
"yAngle": {
"title": "Y angle (degrees)",
"brief": "Y angle",
"units": "degrees",
"type": "number"
},
"zAngle": {
"title": "Z angle (degrees)",
"brief": "Z angle",
"units": "degrees",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"x": 0,
"y": 0,
"z": 1,
"xAngle": 37,
"yAngle": 21,
"zAngle": 23
}
Stereotaxic Bregma absolute
{
"type": "object",
"title": "Stereotaxic Bregma absolute",
"properties": {
"apCoordinates": {
"title": "AP coordinates (mm)",
"brief": "AP",
"type": "number"
},
"mlCoordinates": {
"title": "ML coordinates (mm)",
"brief": "ML",
"type": "number"
},
"dvCoordinates": {
"title": "DV coordinates (mm)",
"brief": "DV",
"type": "number"
},
"apAngle": {
"title": "AP angle (degrees)",
"brief": "AP angle",
"type": "number"
},
"mlAngle": {
"title": "ML angle (degrees)",
"brief": "ML angle",
"type": "number"
},
"dvAngle": {
"title": "DV angle (degrees)",
"brief": "DV angle",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"apCoordinates": 4.7,
"mlCoordinates": 4,
"dvCoordinates": 23.2,
"apAngle": 5,
"mlAngle": 5,
"dvAngle": 0
}
Stereotaxic Bregma brain surface
{
"type": "object",
"title": "Stereotaxic Bregma brain surface",
"properties": {
"apCoordinates": {
"title": "AP coordinates (mm)",
"brief": "AP",
"type": "number"
},
"mlCoordinates": {
"title": "ML coordinates (mm)",
"brief": "ML",
"type": "number"
},
"depth": {
"title": "Depth (mm)",
"brief": "Depth",
"type": "number"
},
"rotation": {
"title": "Rotation (degrees)",
"brief": "Rotation",
"type": "number"
},
"apAngle": {
"title": "AP angle (degrees)",
"brief": "AP angle",
"type": "number"
},
"mlAngle": {
"title": "ML angle (degrees)",
"brief": "ML angle",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"apCoordinates": 0.4,
"mlCoordinates": 1.1,
"depth": 12,
"rotation": 0,
"apAngle": 15,
"mlAngle": 15
}
Stereotaxic Lambda absolute
{
"type": "object",
"title": "Stereotaxic Lambda absolute",
"properties": {
"apCoordinates": {
"title": "AP coordinates (mm)",
"brief": "AP",
"type": "number"
},
"mlCoordinates": {
"title": "ML coordinates (mm)",
"brief": "ML",
"type": "number"
},
"dvCoordinates": {
"title": "DV coordinates (mm)",
"brief": "DV",
"type": "number"
},
"apAngle": {
"title": "AP angle (degrees)",
"brief": "AP angle",
"type": "number"
},
"mlAngle": {
"title": "ML angle (degrees)",
"brief": "ML angle",
"type": "number"
},
"dvAngle": {
"title": "DV angle (degrees)",
"brief": "CV angle",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"apCoordinates": 4.7,
"mlCoordinates": 4,
"dvCoordinates": 23.2,
"apAngle": 5,
"mlAngle": 5,
"dvAngle": 0
}
Stereotaxic Lambda brain surface
{
"type": "object",
"title": "Stereotaxic Lambda brain surface",
"properties": {
"apCoordinates": {
"title": "AP coordinates (mm)",
"brief": "AP",
"type": "number"
},
"mlCoordinates": {
"title": "ML coordinates (mm)",
"brief": "ML",
"type": "number"
},
"depth": {
"title": "Depth (mm)",
"brief": "Depth",
"type": "number"
},
"rotation": {
"title": "Rotation (degrees)",
"brief": "Rotation",
"type": "number"
},
"apAngle": {
"title": "AP angle (degrees)",
"brief": "AP angle",
"type": "number"
},
"mlAngle": {
"title": "ML angle (degrees)",
"brief": "ML angle",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"apCoordinates": 0.4,
"mlCoordinates": 1.1,
"depth": 12,
"rotation": 0,
"apAngle": 15,
"mlAngle": 15
}
Stereotaxic XY surface
{
"type": "object",
"title": "Stereotaxic XY surface",
"properties": {
"x": {
"title": "X coordinate (mm)",
"brief": "X",
"type": "number"
},
"y": {
"title": "Y coordinate (mm)",
"brief": "Y",
"type": "number"
},
"xAngle": {
"title": "X angle (degrees)",
"brief": "X angle",
"type": "number"
},
"yAngle": {
"title": "Y angle (degrees)",
"brief": "Y angle",
"type": "number"
},
"depth": {
"title": "Depth (mm)",
"brief": "Depth",
"type": "number"
},
"rotation": {
"title": "Rotation (degrees)",
"brief": "Rotation",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"x": 0,
"y": 4,
"xAngle": 30,
"yAngle": 15,
"depth": 0.1,
"rotation": 10
}
Stereotaxic XYZ absolute
{
"type": "object",
"title": "Stereotaxic XYZ absolute",
"properties": {
"x": {
"title": "X coordinate (mm)",
"brief": "X",
"type": "number"
},
"y": {
"title": "Y coordinate (mm)",
"brief": "Y",
"type": "number"
},
"z": {
"title": "Z coordinates (mm)",
"brief": "Z",
"type": "number"
},
"xAngle": {
"title": "X angle (degrees)",
"brief": "X angle",
"type": "number"
},
"yAngle": {
"title": "Y angle (degrees)",
"brief": "Y angle",
"type": "number"
},
"zAngle": {
"title": "Z angle (degrees)",
"brief": "Z angle",
"type": "number"
}
}
}
Example of JSON according to this schema
{
"x": 0,
"y": 0,
"z": 1,
"xAngle": 37,
"yAngle": 21,
"zAngle": 23
}