Procedure schemas

Table of contents

1. Optic fiber implant
2. Silicon probe implant
3. Single wire electrode
4. Tetrode wire electrode
5. Virus injection

Optic fiber implant

{
    "type": "object",
    "title": "Optic fiber implant",
    "properties": {
        "fiberTipShape": {
            "title": "Fiber tip shape",
            "type": "string",
            "format": "text",
            "default": "flat"
        }
    },
    "required": ["fiberTipShape"]
}

Fiber tip shape is a required field - default value set is flat.

Example of JSON according to this schema

{
    "fiberTipShape": "flat"
}

Silicon probe implant

{
    "type": "object",
    "title": "Silicon probe implant",
    "properties": {
    }
}

Example of JSON according to this schema

{ }

Single wire electrode

{
    "type": "object",
    "title": "Single wire electrode",
    "properties": {
        "wireCount": {
            "title": "Wire count",
            "type": "number",
            "minimum": 0,
            "default": 1
        },
        "wireDiameter": {
            "title": "Wire diameter (µm)",
            "type": "number",
            "minimum": 0
        },
        "wireMaterial": {
            "title": "Wire material",
            "type": "string",
            "format": "text"
        }
    },
    "required": ["wireCount"]
}

Wire count is a required field - default value set is 1.

Example of JSON according to this schema

{
    "wireCount": 4,
    "wireDiameter": 50,
    "wireMaterial": "Titanium",
    "rotation": 0,
    "apAngle": 15,
    "mlAngle": 15
}

Tetrode wire electrode

{
    "type": "object",
    "title": "Tetrode wire electrode",
    "properties": {
        "tetrodeCount": {
            "title": "Tetrode count",
            "type": "integer",
            "minimum": 0,
            "default": 1
        },
        "nWiresTetrode": {
            "title": "Wires per tetrode",
            "type": "integer",
            "minimum": 0,
            "default": 4
        },
        "wireDiameter": {
            "title": "Wire diameter (µm)",
            "type": "number",
            "minimum": 0
        },
        "wireMaterial": {
            "title": "Wire material",
            "type": "string",
            "format": "text"
        }
    },
    "required": ["tetrodeCount"]
}

Tetrode count is a required field - default value set is 1.

Example of JSON according to this schema

{
    "tetrodeCount": 2,
    "nWiresTetrode": 4,
    "wireDiameter": 50,
    "wireMaterial": "Titanium"
}

Virus injection

{
    "type": "object",
    "title": "Virus injection",
    "properties": {
        "injectionVolume": {
            "title": "Injection volume (nL)",
            "type": "number",
            "minimum": 0,
            "default": "0"
        },
        "injectionRate": {
            "title": "Injection Rate (nL/s)",
            "type": "number"
        },
        "injectionSchema": {
            "title": "Injection schema",
            "type": "string",
            "enum": ["Gradual","Pulses","unknown"]
        }
    },
    "required": ["injectionVolume"]
}

Injection volume is a required field - default value set is 0.

Example of JSON according to this schema

{
    "injectionVolume": 100,
    "injectionRate": 50,
    "injectionSchema": "Gradual"
}